STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30380.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
EEU30381.1
uracil-DNA glycosylase, family 4.
       0.799
EEU30379.1
YhgE/Pip domain protein.
       0.594
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
   0.576
EEU30383.1
DJ-1 family protein.
       0.576
EEU30382.1
Hydrolase, alpha/beta domain protein.
       0.565
EEU30378.1
Hypothetical protein; 5' partial; truncated CDS; unextendable partial coding region.
       0.558
EEU30243.1
AP endonuclease, family 2.
  
     0.468
EEU30646.1
DNA internalization competence protein ComEC/Rec2-like protein.
  
    0.467
EEU30376.1
Putative NAD-dependent malic enzyme 3.
       0.445
EEU30377.1
Auxin efflux carrier.
       0.435
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.