STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30486.1Putative phage terminase, large subunit. (539 aa)    
Predicted Functional Partners:
EEU30491.1
HNH endonuclease domain protein.
 
  
 0.922
EEU30485.1
Phage portal protein, HK97 family.
 
   
 0.918
EEU30483.1
Phage major capsid protein, HK97 family.
 
     0.893
EEU30488.1
Hypothetical protein.
 
    0.873
clpP
Endopeptidase Clp; Belongs to the peptidase S14 family.
 
     0.865
EEU30490.1
Hypothetical protein.
 
     0.851
EEU30489.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.837
EEU30480.1
Toxin secretion/phage lysis holin.
 
   
 0.736
EEU30487.1
Hypothetical protein.
       0.642
EEU30482.1
Putative phage DNA packaging protein.
 
     0.610
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.