STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30488.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
EEU30489.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.918
EEU30490.1
Hypothetical protein.
 
     0.904
EEU30485.1
Phage portal protein, HK97 family.
 
  
 0.889
EEU30486.1
Putative phage terminase, large subunit.
 
    0.873
EEU30483.1
Phage major capsid protein, HK97 family.
 
   
 0.864
clpP
Endopeptidase Clp; Belongs to the peptidase S14 family.
 
    0.862
EEU30482.1
Putative phage DNA packaging protein.
 
     0.841
EEU30496.1
Hypothetical protein.
 
    0.833
EEU30487.1
Hypothetical protein.
       0.775
EEU30480.1
Toxin secretion/phage lysis holin.
 
     0.761
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.