STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30491.1HNH endonuclease domain protein. (125 aa)    
Predicted Functional Partners:
EEU30486.1
Putative phage terminase, large subunit.
 
  
 0.922
EEU30489.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.882
EEU30490.1
Hypothetical protein.
 
    0.860
EEU30485.1
Phage portal protein, HK97 family.
 
  
 0.825
EEU30483.1
Phage major capsid protein, HK97 family.
 
   
 0.712
EEU30494.1
VRR-NUC domain protein.
 
     0.704
EEU30488.1
Hypothetical protein.
 
    0.702
EEU30493.1
SNF2 family N-terminal domain protein.
 
   
 0.610
EEU30498.1
Hypothetical protein.
 
     0.570
EEU30480.1
Toxin secretion/phage lysis holin.
 
  
 0.539
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.