STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30495.1Phage/plasmid primase, P4 family domain protein. (751 aa)    
Predicted Functional Partners:
EEU30496.1
Hypothetical protein.
 
     0.952
EEU30500.1
Hypothetical protein.
 
     0.873
EEU30494.1
VRR-NUC domain protein.
 
     0.834
EEU30490.1
Hypothetical protein.
 
     0.810
EEU30499.1
Hypothetical protein.
 
     0.799
EEU30482.1
Putative phage DNA packaging protein.
 
     0.789
EEU30497.1
Putative DNA-directed DNA polymerase.
 
     0.779
EEU30493.1
SNF2 family N-terminal domain protein.
 
     0.749
EEU30498.1
Hypothetical protein.
 
     0.740
EEU30488.1
Hypothetical protein.
 
     0.728
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.