STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30527.1Acetyltransferase, GNAT family. (173 aa)    
Predicted Functional Partners:
EEU30526.1
Hypothetical protein.
 
     0.744
EEU30524.1
uracil-DNA glycosylase family protein.
  
    0.517
EEU30928.1
Acetyltransferase, GNAT family.
 
 
 0.508
EEU30528.1
Hypothetical protein.
       0.498
EEU30500.1
Hypothetical protein.
 
   
 0.494
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.463
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
  
  0.455
EEU30525.1
6-O-methylguanine DNA methyltransferase, DNA binding domain protein.
       0.450
EEU30530.1
Lactate/malate dehydrogenase, NAD binding domain protein.
  
   0.437
EEU30529.1
Hypothetical protein; Belongs to the glutamate--cysteine ligase type 1 family.
       0.431
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.