STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU29977.1Putative ComG operon protein 3. (100 aa)    
Predicted Functional Partners:
EEU29978.1
Bacterial type II secretion system domain protein F.
 
  
 0.973
EEU29979.1
Type II/IV secretion system protein; Truncated CDS.
 
  
 0.970
EEU29976.1
Hypothetical protein.
  
 
 0.968
EEU30646.1
DNA internalization competence protein ComEC/Rec2-like protein.
   
  
 0.820
EEU29975.1
Hypothetical protein.
       0.682
EEU30146.1
Putative ComF operon protein 1.
 
  
 0.669
EEU29972.1
Hypothetical protein.
 
     0.663
EEU29591.1
Transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family.
 
     0.662
EEU29980.1
DNA-binding regulatory protein, YebC/PmpR family.
       0.656
EEU30422.1
Bacterial peptidase A24, N-terminal domain protein.
 
  
 0.623
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.