STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30013.1ABC transporter, substrate-binding protein, family 3. (281 aa)    
Predicted Functional Partners:
EEU30015.1
Putative arginine ABC transporter, permease protein ArtQ.
 0.999
artM-2
Arginine ABC transporter, ATP-binding protein ArtM.
 0.998
EEU29673.1
ABC transporter, permease protein.
 0.980
artM
Arginine ABC transporter, ATP-binding protein ArtM.
 0.860
EEU30752.1
ABC transporter, permease protein.
 0.814
gluA
Glutamate ABC transporter, ATP-binding protein GluA.
 0.800
EEU30753.1
ABC transporter, permease protein.
 
 0.765
glnQ
Glutamine ABC transporter, ATP-binding protein GlnQ.
 0.737
pstS
Phosphate binding protein.
     
 0.684
EEU30011.1
Peptidase M16 inactive domain protein.
       0.583
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.