STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCRod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (283 aa)    
Predicted Functional Partners:
mreD
Rod shape-determining protein MreD.
  
 
 0.988
mreB
Rod shape-determining protein MreB.
 
 
 0.984
mbl
Mbl protein.
 
 
 0.960
EEU31119.1
Penicillin-binding protein, transpeptidase domain protein.
 
 
 0.940
EEU30609.1
Putative penicillin-binding protein 2B.
 
 
 0.911
EEU30019.1
DNA repair protein RadC family protein; Truncated CDS.
  
  
 0.812
EEU30035.1
Cell cycle protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family.
 
  
 0.741
EEU30619.1
Septum site-determining protein divIVA family protein.
 
 
 0.702
EEU31169.1
Penicillin-binding protein, 1A family.
  
 
 0.700
EEU30467.1
CamS sex pheromone family protein.
  
    0.688
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.