Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEU30025.1 | EEU31113.1 | HMPREF0501_01030 | HMPREF0501_00518 | Putative cysteine desulfurase. | Rhodanese-like protein. | 0.690 |
| EEU30025.1 | ezrA | HMPREF0501_01030 | HMPREF0501_01031 | Putative cysteine desulfurase. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.645 |
| EEU30025.1 | iscS | HMPREF0501_01030 | HMPREF0501_00300 | Putative cysteine desulfurase. | Cysteine desulfurase. | 0.971 |
| EEU30025.1 | thiI | HMPREF0501_01030 | HMPREF0501_01029 | Putative cysteine desulfurase. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.997 |
| EEU30646.1 | cinA | HMPREF0501_00051 | HMPREF0501_01013 | DNA internalization competence protein ComEC/Rec2-like protein. | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | 0.812 |
| EEU30646.1 | thiI | HMPREF0501_00051 | HMPREF0501_01029 | DNA internalization competence protein ComEC/Rec2-like protein. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.482 |
| EEU30976.1 | cinA | HMPREF0501_00381 | HMPREF0501_01013 | NOL1/NOP2/sun family protein. | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | 0.470 |
| EEU30976.1 | sun | HMPREF0501_00381 | HMPREF0501_00416 | NOL1/NOP2/sun family protein. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.478 |
| EEU30976.1 | thiI | HMPREF0501_00381 | HMPREF0501_01029 | NOL1/NOP2/sun family protein. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.510 |
| EEU31113.1 | EEU30025.1 | HMPREF0501_00518 | HMPREF0501_01030 | Rhodanese-like protein. | Putative cysteine desulfurase. | 0.690 |
| EEU31113.1 | iscS | HMPREF0501_00518 | HMPREF0501_00300 | Rhodanese-like protein. | Cysteine desulfurase. | 0.690 |
| EEU31113.1 | thiI | HMPREF0501_00518 | HMPREF0501_01029 | Rhodanese-like protein. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.534 |
| cinA | EEU30646.1 | HMPREF0501_01013 | HMPREF0501_00051 | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | DNA internalization competence protein ComEC/Rec2-like protein. | 0.812 |
| cinA | EEU30976.1 | HMPREF0501_01013 | HMPREF0501_00381 | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | NOL1/NOP2/sun family protein. | 0.470 |
| cinA | sun | HMPREF0501_01013 | HMPREF0501_00416 | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.540 |
| cinA | thiI | HMPREF0501_01013 | HMPREF0501_01029 | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.562 |
| cinA | trmU | HMPREF0501_01013 | HMPREF0501_00031 | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.505 |
| ezrA | EEU30025.1 | HMPREF0501_01031 | HMPREF0501_01030 | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | Putative cysteine desulfurase. | 0.645 |
| ezrA | thiI | HMPREF0501_01031 | HMPREF0501_01029 | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.645 |
| iscS | EEU30025.1 | HMPREF0501_00300 | HMPREF0501_01030 | Cysteine desulfurase. | Putative cysteine desulfurase. | 0.971 |
page 1 of 3