STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30134.1Cof-like hydrolase. (266 aa)    
Predicted Functional Partners:
EEU29986.1
Cof-like hydrolase.
  
     0.735
trxB
Thioredoxin-disulfide reductase.
  
    0.681
pgcA
Phosphoglucomutase.
  
 
 0.648
galU
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.557
EEU30244.1
Cof-like hydrolase.
 
 
 
0.536
EEU30132.1
HD domain protein.
       0.438
ribF
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
   
 0.403
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.