STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30145.1comF family protein. (224 aa)    
Predicted Functional Partners:
EEU30146.1
Putative ComF operon protein 1.
  
  
 0.946
EEU30646.1
DNA internalization competence protein ComEC/Rec2-like protein.
 
  
 0.881
dprA
DNA protecting protein DprA.
 
 
 0.824
EEU30644.1
comEA protein.
 
  
 0.735
EEU30147.1
YigZ family protein.
  
    0.698
EEU30019.1
DNA repair protein RadC family protein; Truncated CDS.
 
    0.692
raiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.657
EEU29978.1
Bacterial type II secretion system domain protein F.
 
  
 0.545
nagA
N-acetylglucosamine-6-phosphate deacetylase.
  
    0.543
EEU30793.1
ATP-dependent DNA helicase, RecQ family.
 
  
  0.473
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.