STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBHomoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (287 aa)    
Predicted Functional Partners:
EEU30186.1
Homoserine dehydrogenase.
 
 0.999
thrC
Threonine synthase.
 
 0.999
EEU29761.1
Methionine synthase, vitamin-B12 independent.
  
 
 0.945
EEU29895.1
Putative L-serine dehydratase, iron-sulfur-dependent, beta subunit.
  
 
 0.942
EEU29896.1
L-serine dehydratase, iron-sulfur-dependent, alpha subunit family protein; Truncated CDS.
  
 
 0.942
EEU30695.1
Putative aspartate kinase I.
 
 0.803
EEU30772.1
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.798
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
    
 0.709
asd
Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
  
 0.604
folP
Dihydropteroate synthase.
    
 0.520
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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