Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEU30689.1 | pyk | HMPREF0501_00094 | HMPREF0501_00189 | Ribosomal protein L7Ae. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.979 |
| EEU30689.1 | rplJ | HMPREF0501_00094 | HMPREF0501_01194 | Ribosomal protein L7Ae. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
| EEU30689.1 | rpmA | HMPREF0501_00094 | HMPREF0501_00507 | Ribosomal protein L7Ae. | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.463 |
| EEU30689.1 | rpsB | HMPREF0501_00094 | HMPREF0501_00082 | Ribosomal protein L7Ae. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
| EEU30689.1 | rpsO | HMPREF0501_00094 | HMPREF0501_00054 | Ribosomal protein L7Ae. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
| pyk | EEU30689.1 | HMPREF0501_00189 | HMPREF0501_00094 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Ribosomal protein L7Ae. | 0.979 |
| pyk | rplJ | HMPREF0501_00189 | HMPREF0501_01194 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
| pyk | rpsB | HMPREF0501_00189 | HMPREF0501_00082 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.950 |
| pyk | rpsO | HMPREF0501_00189 | HMPREF0501_00054 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.890 |
| rplJ | EEU30689.1 | HMPREF0501_01194 | HMPREF0501_00094 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein L7Ae. | 0.999 |
| rplJ | pyk | HMPREF0501_01194 | HMPREF0501_00189 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.999 |
| rplJ | rplS | HMPREF0501_01194 | HMPREF0501_00392 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
| rplJ | rpmA | HMPREF0501_01194 | HMPREF0501_00507 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
| rplJ | rpmB | HMPREF0501_01194 | HMPREF0501_00410 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
| rplJ | rpsB | HMPREF0501_01194 | HMPREF0501_00082 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
| rplJ | rpsO | HMPREF0501_01194 | HMPREF0501_00054 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
| rplJ | rpsP | HMPREF0501_01194 | HMPREF0501_00397 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
| rplJ | rpsT | HMPREF0501_01194 | HMPREF0501_00053 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.999 |
| rplJ | rpsU | HMPREF0501_01194 | HMPREF0501_00165 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.999 |
| rplS | rplJ | HMPREF0501_00392 | HMPREF0501_01194 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
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