Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEU29886.1Putative protein ThiW. (186 aa)    
Predicted Functional Partners:
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 0.941
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.931
EEU30302.1
Cobalt transport protein.
  
 0.891
EEU30155.1
biotin--[acetyl-CoA-carboxylase] ligase.
     
 0.834
EEU29885.1
Hypothetical protein; Truncated CDS.
 
     0.630
EEU30303.1
ABC transporter, ATP-binding protein.
    
  0.565
EEU29887.1
Hypothetical protein; Belongs to the UPF0246 family.
 
     0.545
EEU30331.1
DHHA1 domain protein.
  
     0.529
EEU31125.1
Hypothetical protein.
 
     0.504
EEU30354.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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