STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU29923.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
EEU29921.1
Putative exopolyphosphatase.
 
     0.832
EEU29922.1
hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family.
  
    0.831
EEU29924.1
Transcriptional regulator, Sir2 family; 5' partial; unextendable partial coding region.
  
    0.760
EEU30746.1
Hypothetical protein.
  
     0.725
EEU30294.1
Hypothetical protein.
  
     0.717
EEU30085.1
Hypothetical protein.
  
     0.697
EEU30652.1
Hypothetical protein.
  
     0.694
EEU30634.1
Hypothetical protein.
  
     0.680
EEU30348.1
Hypothetical protein.
  
     0.630
EEU30792.1
Hypothetical protein.
  
     0.612
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.