STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU29932.1ABC transporter, substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. (303 aa)    
Predicted Functional Partners:
EEU29934.1
ABC 3 transport family protein.
 
 
 0.976
EEU29933.1
ABC transporter, ATP-binding protein.
 
 
 0.947
EEU30849.1
ABC 3 transport family protein.
 
 
 0.899
EEU29804.1
ABC 3 transport family protein; Truncated CDS.
 
 
 0.882
EEU29803.1
ABC transporter, ATP-binding protein; 5' partial; truncated CDS; unextendable partial coding region.
 
 
 0.785
EEU30848.1
ABC transporter, ATP-binding protein.
 
 
 0.753
EEU30399.1
FeoA domain protein; 5' partial; truncated CDS; unextendable partial coding region.
  
 
 0.705
ispE
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.518
purR
Pur operon repressor PurR.
       0.494
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
       0.473
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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