EEU29670.1 protein (Lactobacillus coleohominis)

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Score

EEU29670.1

Raf-like protein. (167 aa)

Predicted Functional Partners:

rplS

0.824

rpsB

0.823

rplB

0.823

rplM

0.822

rpsO

0.821

rpmF

0.821

rpsE

0.821

rpmA

0.820

rpmJ

0.819

rpsJ

0.818

Your Current Organism:

Lactobacillus coleohominis

NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEU29670.1	rplB	HMPREF0501_01464	HMPREF0501_00809	Raf-like protein.	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.823
EEU29670.1	rplM	HMPREF0501_01464	HMPREF0501_00837	Raf-like protein.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.822
EEU29670.1	rplS	HMPREF0501_01464	HMPREF0501_00392	Raf-like protein.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.824
EEU29670.1	rpmA	HMPREF0501_01464	HMPREF0501_00507	Raf-like protein.	Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.820
EEU29670.1	rpmF	HMPREF0501_01464	HMPREF0501_00541	Raf-like protein.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.821
EEU29670.1	rpmJ	HMPREF0501_01464	HMPREF0501_00829	Raf-like protein.	Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.819
EEU29670.1	rpsB	HMPREF0501_01464	HMPREF0501_00082	Raf-like protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.823
EEU29670.1	rpsE	HMPREF0501_01464	HMPREF0501_00823	Raf-like protein.	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.821
EEU29670.1	rpsJ	HMPREF0501_01464	HMPREF0501_00805	Raf-like protein.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.818
EEU29670.1	rpsO	HMPREF0501_01464	HMPREF0501_00054	Raf-like protein.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.821
rplB	EEU29670.1	HMPREF0501_00809	HMPREF0501_01464	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Raf-like protein.	0.823
rplB	rplM	HMPREF0501_00809	HMPREF0501_00837	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplB	rplS	HMPREF0501_00809	HMPREF0501_00392	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.999
rplB	rpmA	HMPREF0501_00809	HMPREF0501_00507	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplB	rpmF	HMPREF0501_00809	HMPREF0501_00541	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplB	rpmJ	HMPREF0501_00809	HMPREF0501_00829	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.999
rplB	rpsB	HMPREF0501_00809	HMPREF0501_00082	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rplB	rpsE	HMPREF0501_00809	HMPREF0501_00823	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplB	rpsJ	HMPREF0501_00809	HMPREF0501_00805	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplB	rpsO	HMPREF0501_00809	HMPREF0501_00054	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999