STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU29696.1LysM domain protein. (618 aa)    
Predicted Functional Partners:
EEU30757.1
Putative N-acetylmuramoyl-L-alanine amidase.
  
 
 0.975
cinA
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
 
 
 0.896
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.885
EEU31037.1
NlpC/P60 family protein.
  
 
 0.702
EEU30518.1
Gram-positive signal peptide protein, YSIRK family.
   
 
 0.679
EEU31028.1
Glycosyl hydrolase family 25.
  
 0.617
EEU30609.1
Putative penicillin-binding protein 2B.
 
 0.616
EEU30560.1
Cell wall-binding repeat protein.
 
 
 0.590
EEU31195.1
LysM domain protein.
 
  
0.569
EEU30551.1
Hypothetical protein.
 
     0.536
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.