STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU29735.1YycH protein. (268 aa)    
Predicted Functional Partners:
EEU29736.1
YycH protein.
 
  
 0.976
EEU29737.1
Putative sensor protein kinase WalK.
 
  
 0.912
EEU29734.1
Metallo-beta-lactamase domain protein.
  
  
 0.878
walR
Transcriptional regulatory protein WalR.
  
  
 0.806
EEU29739.1
Hypothetical protein.
       0.741
htrA
Serine protease do-like HtrA.
  
  
 0.735
EEU29956.1
CBS domain protein.
 
     0.698
EEU30969.1
Hypothetical protein.
  
     0.657
EEU30467.1
CamS sex pheromone family protein.
  
     0.619
prsA
Putative foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
  
     0.569
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.