STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU29737.1Putative sensor protein kinase WalK. (620 aa)    
Predicted Functional Partners:
walR
Transcriptional regulatory protein WalR.
 0.999
EEU29611.1
Response regulator receiver domain protein.
 0.950
EEU30076.1
Putative transcriptional regulatory protein ResD.
 0.949
arlR
Response regulator ArlR.
 0.927
EEU29735.1
YycH protein.
 
  
 0.912
EEU29736.1
YycH protein.
 
  
 0.893
EEU29867.1
Putative transcriptional activator protein CopR.
 0.872
EEU30700.1
Response regulator receiver domain protein.
 0.866
EEU29734.1
Metallo-beta-lactamase domain protein.
  
  
 0.863
EEU29578.1
Transcriptional regulatory protein, C-terminal domain protein; Truncated CDS.
 
 0.851
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.