STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU29592.1Putative glutamate/gamma-aminobutyrate antiporter; Truncated CDS. (279 aa)    
Predicted Functional Partners:
EEU30864.1
Amino acid permease.
  
  
 
0.767
EEU29594.1
Putative glutamate decarboxylase; Truncated CDS.
 
 
 0.764
treC
Alpha,alpha-phosphotrehalase.
  
 0.729
gtfA
Sucrose phosphorylase.
  
 0.729
EEU29593.1
Hypothetical protein.
       0.714
EEU29590.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
 
 
 0.572
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
   
   0.459
EEU30358.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.