Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI41351.1 | EFI41462.1 | HMPREF0629_01409 | HMPREF0629_00081 | Hypothetical protein. | Outer membrane insertion signal domain protein. | 0.501 |
EFI41351.1 | EFI41852.1 | HMPREF0629_01409 | HMPREF0629_00481 | Hypothetical protein. | Hypothetical protein. | 0.567 |
EFI41351.1 | EFI41858.1 | HMPREF0629_01409 | HMPREF0629_00487 | Hypothetical protein. | Outer layer protein B; S-layer protein 1. | 0.666 |
EFI41351.1 | EFI42650.1 | HMPREF0629_01409 | HMPREF0629_01309 | Hypothetical protein. | Copper amine oxidase domain protein. | 0.604 |
EFI41461.1 | EFI41462.1 | HMPREF0629_00080 | HMPREF0629_00081 | ABC transporter, ATP-binding protein. | Outer membrane insertion signal domain protein. | 0.867 |
EFI41461.1 | EFI41463.1 | HMPREF0629_00080 | HMPREF0629_00082 | ABC transporter, ATP-binding protein. | Efflux ABC transporter, permease protein. | 0.994 |
EFI41462.1 | EFI41351.1 | HMPREF0629_00081 | HMPREF0629_01409 | Outer membrane insertion signal domain protein. | Hypothetical protein. | 0.501 |
EFI41462.1 | EFI41461.1 | HMPREF0629_00081 | HMPREF0629_00080 | Outer membrane insertion signal domain protein. | ABC transporter, ATP-binding protein. | 0.867 |
EFI41462.1 | EFI41463.1 | HMPREF0629_00081 | HMPREF0629_00082 | Outer membrane insertion signal domain protein. | Efflux ABC transporter, permease protein. | 0.950 |
EFI41462.1 | EFI41852.1 | HMPREF0629_00081 | HMPREF0629_00481 | Outer membrane insertion signal domain protein. | Hypothetical protein. | 0.430 |
EFI41462.1 | EFI41858.1 | HMPREF0629_00081 | HMPREF0629_00487 | Outer membrane insertion signal domain protein. | Outer layer protein B; S-layer protein 1. | 0.463 |
EFI41462.1 | EFI41979.1 | HMPREF0629_00081 | HMPREF0629_00611 | Outer membrane insertion signal domain protein. | Copper amine oxidase domain protein. | 0.446 |
EFI41462.1 | EFI42650.1 | HMPREF0629_00081 | HMPREF0629_01309 | Outer membrane insertion signal domain protein. | Copper amine oxidase domain protein. | 0.445 |
EFI41463.1 | EFI41461.1 | HMPREF0629_00082 | HMPREF0629_00080 | Efflux ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.994 |
EFI41463.1 | EFI41462.1 | HMPREF0629_00082 | HMPREF0629_00081 | Efflux ABC transporter, permease protein. | Outer membrane insertion signal domain protein. | 0.950 |
EFI41852.1 | EFI41351.1 | HMPREF0629_00481 | HMPREF0629_01409 | Hypothetical protein. | Hypothetical protein. | 0.567 |
EFI41852.1 | EFI41462.1 | HMPREF0629_00481 | HMPREF0629_00081 | Hypothetical protein. | Outer membrane insertion signal domain protein. | 0.430 |
EFI41852.1 | EFI42650.1 | HMPREF0629_00481 | HMPREF0629_01309 | Hypothetical protein. | Copper amine oxidase domain protein. | 0.764 |
EFI41858.1 | EFI41351.1 | HMPREF0629_00487 | HMPREF0629_01409 | Outer layer protein B; S-layer protein 1. | Hypothetical protein. | 0.666 |
EFI41858.1 | EFI41462.1 | HMPREF0629_00487 | HMPREF0629_00081 | Outer layer protein B; S-layer protein 1. | Outer membrane insertion signal domain protein. | 0.463 |
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