Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI41379.1 | EFI41526.1 | HMPREF0629_01439 | HMPREF0629_00148 | Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family. | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | 0.752 |
EFI41379.1 | tadA | HMPREF0629_01439 | HMPREF0629_00362 | Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family. | Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.457 |
EFI41487.1 | EFI41526.1 | HMPREF0629_00108 | HMPREF0629_00148 | Hypothetical protein. | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | 0.640 |
EFI41526.1 | EFI41379.1 | HMPREF0629_00148 | HMPREF0629_01439 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family. | 0.752 |
EFI41526.1 | EFI41487.1 | HMPREF0629_00148 | HMPREF0629_00108 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Hypothetical protein. | 0.640 |
EFI41526.1 | EFI41837.1 | HMPREF0629_00148 | HMPREF0629_00465 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.487 |
EFI41526.1 | EFI42105.1 | HMPREF0629_00148 | HMPREF0629_00744 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Hypothetical protein. | 0.487 |
EFI41526.1 | EFI42498.1 | HMPREF0629_00148 | HMPREF0629_01152 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Hypothetical protein. | 0.423 |
EFI41526.1 | EFI42677.1 | HMPREF0629_00148 | HMPREF0629_01339 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Phosphoglycerate mutase family protein. | 0.433 |
EFI41526.1 | birA | HMPREF0629_00148 | HMPREF0629_00582 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.680 |
EFI41526.1 | ribF | HMPREF0629_00148 | HMPREF0629_00921 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. | 0.430 |
EFI41526.1 | sorA | HMPREF0629_00148 | HMPREF0629_00149 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Superoxide reductase. | 0.605 |
EFI41526.1 | tadA | HMPREF0629_00148 | HMPREF0629_00362 | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.469 |
EFI41837.1 | EFI41526.1 | HMPREF0629_00465 | HMPREF0629_00148 | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | 0.487 |
EFI41837.1 | EFI42498.1 | HMPREF0629_00465 | HMPREF0629_01152 | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Hypothetical protein. | 0.725 |
EFI42105.1 | EFI41526.1 | HMPREF0629_00744 | HMPREF0629_00148 | Hypothetical protein. | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | 0.487 |
EFI42105.1 | ribF | HMPREF0629_00744 | HMPREF0629_00921 | Hypothetical protein. | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. | 0.525 |
EFI42105.1 | tadA | HMPREF0629_00744 | HMPREF0629_00362 | Hypothetical protein. | Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.490 |
EFI42498.1 | EFI41526.1 | HMPREF0629_01152 | HMPREF0629_00148 | Hypothetical protein. | Nitroreductase family protein; Belongs to the flavin oxidoreductase frp family. | 0.423 |
EFI42498.1 | EFI41837.1 | HMPREF0629_01152 | HMPREF0629_00465 | Hypothetical protein. | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.725 |
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