STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI41704.1S-layer protein 2. (739 aa)    
Predicted Functional Partners:
EFI42218.1
FHA domain protein.
 
 
 
 0.929
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
  0.877
EFI42200.1
Putative serine/threonine phosphatase stp.
  
 0.804
EFI42123.1
Hypothetical protein.
 
  
 0.775
EFI41880.1
Copper amine oxidase domain protein.
  
   
 0.753
EFI42177.1
Penicillin-binding protein, transpeptidase domain protein; Sporulation-specific penicillin-binding protein.
 
 
 0.750
EFI41524.1
Copper amine oxidase domain protein.
  
   
 0.737
EFI42140.1
Copper amine oxidase domain protein.
  
    0.700
EFI42650.1
Copper amine oxidase domain protein.
  
     0.667
EFI42133.1
Hypothetical protein.
  
    0.559
Your Current Organism:
Peptoniphilus sp. F0131
NCBI taxonomy Id: 575609
Other names: P. sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 strain F0131
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