STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI41900.1ABC transporter, ATP-binding protein. (191 aa)    
Predicted Functional Partners:
EFI41901.1
ABC transporter, permease protein.
 
 
 0.994
EFI41902.1
Hypothetical protein.
  
 
 0.981
EFI41898.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
 
   
 0.763
EFI42528.1
Hypothetical protein.
  
 
 0.715
EFI42258.1
ABC transporter, ATP-binding protein.
  
     0.710
EFI41899.1
Lipid kinase, YegS/Rv2252/BmrU family.
       0.592
modA
Molybdate ABC transporter, periplasmic molybdate-binding protein.
    
 0.572
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.562
EFI42105.1
Hypothetical protein.
  
 
 0.559
EFI41903.1
Putative guanylate kinase.
       0.532
Your Current Organism:
Peptoniphilus sp. F0131
NCBI taxonomy Id: 575609
Other names: P. sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 strain F0131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.