STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI41901.1ABC transporter, permease protein. (261 aa)    
Predicted Functional Partners:
EFI41902.1
Hypothetical protein.
 
 
 0.995
EFI41900.1
ABC transporter, ATP-binding protein.
 
 
 0.994
EFI42528.1
Hypothetical protein.
  
 
 0.745
EFI41898.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
     
 0.599
EFI41899.1
Lipid kinase, YegS/Rv2252/BmrU family.
       0.592
EFI42105.1
Hypothetical protein.
  
 
  0.550
EFI41903.1
Putative guanylate kinase.
       0.532
EFI41904.1
ABC transporter, ATP-binding protein.
    
  0.523
EFI41905.1
ABC transporter, ATP-binding protein.
    
  0.513
EFI41379.1
Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
  
 
 0.473
Your Current Organism:
Peptoniphilus sp. F0131
NCBI taxonomy Id: 575609
Other names: P. sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 strain F0131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.