STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI41937.1Antibiotic biosynthesis monooxygenase. (94 aa)    
Predicted Functional Partners:
pepC
Aminopeptidase C; Belongs to the peptidase C1 family.
       0.780
EFI41601.1
Hypothetical protein.
  
     0.618
EFI42421.1
Hypothetical protein.
  
     0.580
EFI41723.1
Hypothetical protein.
  
     0.544
EFI42036.1
Hypothetical protein; Belongs to the glycosyl hydrolase 26 family.
  
     0.520
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
    0.499
EFI41297.1
Hypothetical protein.
  
     0.497
EFI41495.1
Hypothetical protein.
 
     0.485
EFI42133.1
Hypothetical protein.
  
    0.484
EFI41861.1
4Fe-4S binding domain protein.
 
     0.481
Your Current Organism:
Peptoniphilus sp. F0131
NCBI taxonomy Id: 575609
Other names: P. sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 strain F0131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.