Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI42213.1 | EFI42214.1 | HMPREF0629_00855 | HMPREF0629_00856 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | Hypothetical protein. | 0.927 |
EFI42213.1 | EFI42215.1 | HMPREF0629_00855 | HMPREF0629_00857 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | Hypothetical protein. | 0.777 |
EFI42213.1 | guaB | HMPREF0629_00855 | HMPREF0629_00853 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.485 |
EFI42213.1 | phoP | HMPREF0629_00855 | HMPREF0629_00854 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.978 |
EFI42214.1 | EFI42213.1 | HMPREF0629_00856 | HMPREF0629_00855 | Hypothetical protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | 0.927 |
EFI42214.1 | EFI42215.1 | HMPREF0629_00856 | HMPREF0629_00857 | Hypothetical protein. | Hypothetical protein. | 0.775 |
EFI42214.1 | guaB | HMPREF0629_00856 | HMPREF0629_00853 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.479 |
EFI42214.1 | phoP | HMPREF0629_00856 | HMPREF0629_00854 | Hypothetical protein. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.844 |
EFI42215.1 | EFI42213.1 | HMPREF0629_00857 | HMPREF0629_00855 | Hypothetical protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | 0.777 |
EFI42215.1 | EFI42214.1 | HMPREF0629_00857 | HMPREF0629_00856 | Hypothetical protein. | Hypothetical protein. | 0.775 |
EFI42215.1 | guaB | HMPREF0629_00857 | HMPREF0629_00853 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.473 |
EFI42215.1 | phoP | HMPREF0629_00857 | HMPREF0629_00854 | Hypothetical protein. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.769 |
guaB | EFI42213.1 | HMPREF0629_00853 | HMPREF0629_00855 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | 0.485 |
guaB | EFI42214.1 | HMPREF0629_00853 | HMPREF0629_00856 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Hypothetical protein. | 0.479 |
guaB | EFI42215.1 | HMPREF0629_00853 | HMPREF0629_00857 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Hypothetical protein. | 0.473 |
guaB | phoP | HMPREF0629_00853 | HMPREF0629_00854 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.560 |
phoP | EFI42213.1 | HMPREF0629_00854 | HMPREF0629_00855 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | 0.978 |
phoP | EFI42214.1 | HMPREF0629_00854 | HMPREF0629_00856 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Hypothetical protein. | 0.844 |
phoP | EFI42215.1 | HMPREF0629_00854 | HMPREF0629_00857 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Hypothetical protein. | 0.769 |
phoP | guaB | HMPREF0629_00854 | HMPREF0629_00853 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.560 |