STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI42331.1Antioxidant, AhpC/TSA family. (150 aa)    
Predicted Functional Partners:
pepD-4
Xaa-His dipeptidase.
    
  0.848
EFI42330.1
Radical SAM protein, TIGR01212 family.
       0.799
EFI42332.1
Hypothetical protein.
       0.797
EFI42329.1
Hypothetical protein.
       0.774
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.715
EFI42693.1
Thioredoxin.
  
 
 0.638
ahpC
Alkyl hydroperoxide reductase subunit C.
 
 
0.587
EFI41310.1
Rubredoxin.
  
  
 0.530
EFI42334.1
RelA/SpoT domain protein.
       0.529
EFI42031.1
Homoserine dehydrogenase.
    
  0.526
Your Current Organism:
Peptoniphilus sp. F0131
NCBI taxonomy Id: 575609
Other names: P. sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 strain F0131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.