STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI42402.1DNA internalization competence protein ComEC/Rec2-like protein. (762 aa)    
Predicted Functional Partners:
dprA
DNA protecting protein DprA.
 
  
 0.927
EFI41784.1
comF family protein.
 
  
 0.914
holA
DNA polymerase III, delta subunit.
 
   
 0.907
EFI42366.1
Bacterial type II secretion system domain protein F.
 
  
 0.881
EFI42364.1
Bacterial peptidase A24, N-terminal domain protein.
 
  
 0.873
EFI42367.1
Putative general secretory pathway protein E.
 
  
 0.840
EFI42365.1
Prepilin-type cleavage/methylation N-terminal domain protein.
  
  
 0.838
EFI42595.1
comEA protein.
 
  
 0.795
EFI42284.1
Molybdopterin binding domain protein.
     
 0.782
EFI42285.1
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
     
 0.782
Your Current Organism:
Peptoniphilus sp. F0131
NCBI taxonomy Id: 575609
Other names: P. sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 str. F0131, Peptoniphilus sp. oral taxon 386 strain F0131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.