Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI41723.1 | EFI42141.1 | HMPREF0629_00347 | HMPREF0629_00781 | Hypothetical protein. | Hypothetical protein. | 0.771 |
EFI41723.1 | EFI42210.1 | HMPREF0629_00347 | HMPREF0629_00851 | Hypothetical protein. | Hypothetical protein. | 0.753 |
EFI41723.1 | EFI42328.1 | HMPREF0629_00347 | HMPREF0629_00974 | Hypothetical protein. | Hypothetical protein. | 0.740 |
EFI41723.1 | EFI42486.1 | HMPREF0629_00347 | HMPREF0629_01139 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase; Cell wall hydrolase; autolysin. | 0.443 |
EFI41723.1 | EFI42487.1 | HMPREF0629_00347 | HMPREF0629_01140 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.735 |
EFI42141.1 | EFI41723.1 | HMPREF0629_00781 | HMPREF0629_00347 | Hypothetical protein. | Hypothetical protein. | 0.771 |
EFI42141.1 | EFI42210.1 | HMPREF0629_00781 | HMPREF0629_00851 | Hypothetical protein. | Hypothetical protein. | 0.730 |
EFI42141.1 | EFI42328.1 | HMPREF0629_00781 | HMPREF0629_00974 | Hypothetical protein. | Hypothetical protein. | 0.769 |
EFI42141.1 | EFI42487.1 | HMPREF0629_00781 | HMPREF0629_01140 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.750 |
EFI42201.1 | EFI42487.1 | HMPREF0629_00842 | HMPREF0629_01140 | Kinase domain protein. | RNA polymerase sigma factor, sigma-70 family. | 0.844 |
EFI42201.1 | rpoZ | HMPREF0629_00842 | HMPREF0629_00833 | Kinase domain protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.749 |
EFI42210.1 | EFI41723.1 | HMPREF0629_00851 | HMPREF0629_00347 | Hypothetical protein. | Hypothetical protein. | 0.753 |
EFI42210.1 | EFI42141.1 | HMPREF0629_00851 | HMPREF0629_00781 | Hypothetical protein. | Hypothetical protein. | 0.730 |
EFI42210.1 | EFI42328.1 | HMPREF0629_00851 | HMPREF0629_00974 | Hypothetical protein. | Hypothetical protein. | 0.661 |
EFI42210.1 | EFI42487.1 | HMPREF0629_00851 | HMPREF0629_01140 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.737 |
EFI42328.1 | EFI41723.1 | HMPREF0629_00974 | HMPREF0629_00347 | Hypothetical protein. | Hypothetical protein. | 0.740 |
EFI42328.1 | EFI42141.1 | HMPREF0629_00974 | HMPREF0629_00781 | Hypothetical protein. | Hypothetical protein. | 0.769 |
EFI42328.1 | EFI42210.1 | HMPREF0629_00974 | HMPREF0629_00851 | Hypothetical protein. | Hypothetical protein. | 0.661 |
EFI42328.1 | EFI42487.1 | HMPREF0629_00974 | HMPREF0629_01140 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.744 |
EFI42486.1 | EFI41723.1 | HMPREF0629_01139 | HMPREF0629_00347 | N-acetylmuramoyl-L-alanine amidase; Cell wall hydrolase; autolysin. | Hypothetical protein. | 0.443 |
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