STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g048472Prolyl 4-hydroxylase subunit alpha-1-like protein. (167 aa)    
Predicted Functional Partners:
L195_g029566
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.848
L195_g019776
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.848
L195_g024293
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.848
L195_g031837
Uncharacterized protein.
    
 0.438
L195_g043721
Protein disulfide isomerase-like 1-6-like.
    
 0.438
L195_g023073
Uncharacterized protein.
    
 0.438
L195_g025281
Protein disulfide isomerase-like 1-6-like.
    
 0.438
L195_g001581
Protein disulfide-isomerase.
    
 0.438
L195_g002125
Uncharacterized protein.
    
 0.438
L195_g003870
Protein disulfide-isomerase.
    
 0.438
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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