STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g048616Pentatricopeptide repeat-containing protein chloroplastic-like. (72 aa)    
Predicted Functional Partners:
metaxin-1-2
Metaxin-1.
  
     0.501
L195_g001600
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
  0.500
L195_g034447
Uncharacterized protein.
  
     0.464
L195_g057254
Calcineurin-like metallo-phosphoesterase superfamily protein.
  
     0.459
L195_g010613
Protein EXECUTER.
  
     0.435
L195_g015003
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
  0.433
L195_g055568
General transcription factor IIE subunit.
  
     0.426
L195_g046762
Rhodanese-like domain-containing protein chloroplastic-like.
  
   0.403
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.