STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g04875740S ribosomal protein sa-like; Belongs to the universal ribosomal protein uS2 family. (224 aa)    
Predicted Functional Partners:
L195_g050198
40S ribosomal protein s23-like; Belongs to the universal ribosomal protein uS12 family.
 
 0.995
L195_g014835
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.994
L195_g030031
37S ribosomal protein mitochondrial-like.
  
 0.993
L195_g041963
40S ribosomal protein s16-like; Belongs to the universal ribosomal protein uS9 family.
  
 0.993
L195_g018315
37S ribosomal protein mitochondrial-like.
  
 0.993
L195_g024420
40S ribosomal protein s29-like.
  
 0.993
L195_g003055
40S ribosomal protein s23-like; Belongs to the universal ribosomal protein uS12 family.
  
 0.993
L195_g007019
40S ribosomal protein s16-like; Belongs to the universal ribosomal protein uS9 family.
  
 0.993
L195_g010808
40S ribosomal protein s29-like.
  
 0.993
L195_g055428
40S ribosomal protein s21-2-like.
   
 0.992
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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