STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g049507Aquaporin PIP11; Belongs to the MIP/aquaporin (TC 1.A.8) family. (180 aa)    
Predicted Functional Partners:
L195_g028157
Katanin p60 ATPase-containing subunit A-like protein 2-like protein.
  
  0.671
L195_g010220
Katanin p60 ATPase-containing subunit A-like protein 2-like protein.
  
  0.671
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
  
  0.658
L195_g048168
Uncharacterized protein.
  
  0.642
L195_g058333
P-loop nucleoside triphosphate hydrolase superfamily protein.
  
  0.642
L195_g050654
26S proteasome regulatory subunit 4 a-like protein.
  
  0.642
L195_g059018
26S protease regulatory subunit 7-like protein.
  
  0.642
L195_g051641
Glycerol kinase.
  
  0.642
L195_g060151
26S protease regulatory subunit 7-like protein.
  
  0.642
L195_g060885
Uncharacterized protein.
  
  0.642
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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