STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g049520Protein brittle-1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (182 aa)    
Predicted Functional Partners:
L195_g019098
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
  0.569
L195_g009388
Putative 60S ribosomal protein L14-like.
   
 
 0.469
L195_g012811
Putative 60S ribosomal protein L14-like.
   
 
 0.469
L195_g059211
60S ribosomal protein l27-like.
   
 
 0.435
L195_g052407
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.435
L195_g026395
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.435
L195_g027437
40S ribosomal protein s28-like.
   
 
 0.419
L195_g050198
40S ribosomal protein s23-like; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.408
L195_g003055
40S ribosomal protein s23-like; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.408
L195_g029189
ADP-ribosylation factor-like protein.
  
     0.405
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.