STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g058231Phosphoenolpyruvate carboxykinase. (121 aa)    
Predicted Functional Partners:
L195_g018152
Malate dehydrogenase.
    
 0.868
L195_g009887
Malate synthase; Belongs to the malate synthase family.
   
 
 0.860
L195_g000553
Aspartate aminotransferase.
     
 0.854
L195_g003387
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.847
L195_g007683
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.846
L195_g033743
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.845
L195_g004152
ATP-citrate synthase beta chain protein 1-like.
     
 0.842
L195_g011368
ATP-citrate synthase alpha chain protein 1-like.
     
 0.841
L195_g014575
Enolase chloroplastic-like.
    
 0.841
L195_g008117
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.839
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.