STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g058402Long chain acyl-CoA synthetase 8-like protein. (123 aa)    
Predicted Functional Partners:
L195_g020978
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.
   
 
 0.893
L195_g012085
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.
    
 0.893
L195_g014314
Monoglyceride lipase.
     
 0.821
L195_g004344
Monoglyceride lipase.
     
 0.818
L195_g038316
Monoglyceride lipase.
     
 0.814
L195_g008605
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
   
 
 0.810
L195_g013189
2-succinylbenzoate-CoA ligase chloroplastic/peroxisomal-like.
    
 0.782
L195_g003593
Palmitoyl-protein thioesterase 1-like.
     
 0.777
L195_g011021
Palmitoyl-protein thioesterase 1-like.
     
 0.777
L195_g028602
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.
   
 
 0.770
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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