STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g050111Uncharacterized protein. (109 aa)    
Predicted Functional Partners:
L195_g040454
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 
 0.899
L195_g024474
Extracellular ribonuclease.
    
 
 0.899
L195_g043815
Ap-2 complex subunit alpha-2-like protein.
    
   0.602
L195_g001326
AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.
    
   0.602
L195_g034443
Uncharacterized protein.
  
 
   0.555
L195_g057594
RAB3 GTPase-activating protein catalytic subunit-like protein.
  
    0.529
L195_g057364
Uncharacterized protein.
  
     0.525
L195_g014243
Uncharacterized protein.
  
     0.523
L195_g028517
GTP binding protein.
  
     0.521
L195_g054982
Vacuolar fusion MON1-like protein.
  
   
 0.515
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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