STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g050119Uncharacterized protein. (277 aa)    
Predicted Functional Partners:
L195_g022100
Retrotransposon-related protein.
  
     0.473
L195_g047565
Ty3/gypsy retrotransposon protein.
  
     0.468
L195_g046348
Ty3/gypsy retrotransposon protein.
  
     0.462
L195_g014529
RNA-directed DNA polymerase (Reverse transcriptase).
  
     0.462
L195_g055895
Retrotransposon-related protein.
  
     0.452
L195_g001420
RT_RNaseH domain-containing protein.
  
     0.442
L195_g006305
Retrotransposon-related protein.
  
     0.442
L195_g048916
RT_RNaseH domain-containing protein.
  
     0.439
L195_g040806
Ty3/gypsy retrotransposon protein.
  
     0.438
L195_g043798
Putative retroelement pol polyprotein.
  
     0.433
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.