STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g058476Early nodulin. (86 aa)    
Predicted Functional Partners:
L195_g047976
NAC domain-containing protein.
  
     0.541
L195_g019294
Putative GPI-anchored protein.
  
     0.540
L195_g048863
Homeobox protein knotted-1-like 3-like.
  
     0.539
L195_g047790
DUF569 domain-containing protein.
  
     0.539
L195_g050592
Xyloglucan endotransglucosylase/hydrolase.
  
     0.538
L195_g027679
CASP-like protein at2g28370-like protein.
  
     0.538
L195_g044414
Xyloglucan endotransglucosylase/hydrolase.
  
     0.538
L195_g036156
BEL1-like homeodomain protein 2-like.
  
     0.537
L195_g020635
Phi-1 protein.
  
     0.537
L195_g014138
Vesicle-associated protein 4-2-like.
  
     0.537
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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