STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g058518Chloride channel protein CLC-b-like. (133 aa)    
Predicted Functional Partners:
L195_g038788
Adenylate kinase; Belongs to the adenylate kinase family.
   
 
  0.626
L195_g006134
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
   
 
  0.626
L195_g011607
NADH dehydrogenase subunit 5.
     
 0.444
L195_g031619
ATP-dependent RNA helicase fal1-like protein.
      
 0.437
L195_g000786
Chloride channel protein.
    
 
 0.406
L195_g058440
Vacuolar-processing enzyme-like protein.
   
 
 0.402
L195_g033414
Vacuolar-processing enzyme-like protein.
   
 
 0.402
L195_g047336
Vacuolar-processing enzyme-like protein.
   
 
 0.402
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.