STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g050899Heat shock protein. (199 aa)    
Predicted Functional Partners:
L195_g025399
Iron-sulfur cluster co-chaperone protein HscB mitochondrial-like.
  
 0.817
L195_g039777
Luminal-binding protein 5-like.
  
 0.747
L195_g044076
Luminal-binding protein 5-like.
  
 0.741
L195_g045523
Luminal-binding protein 5-like.
  
 0.714
L195_g056315
Stromal 70 kDa heat shock-related protein chloroplastic-like.
  
  0.629
L195_g056309
Stromal 70 kDa heat shock-related protein chloroplastic-like.
  
  0.626
L195_g055975
Stromal 70 kDa heat shock-related protein chloroplastic-like.
  
  0.614
L195_g061820
Stromal 70 kDa heat shock-related protein chloroplastic-like.
  
  0.613
L195_g050970
Chaperone protein dnaJ 72-like.
  
  0.600
L195_g040041
Endoplasmin.
   
 0.598
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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