STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g060473Reverse transcriptase Ty1/copia-type domain-containing protein. (157 aa)    
Predicted Functional Partners:
L195_g062273
Reverse transcriptase.
  
     0.508
L195_g061065
Copia-type polyprotein.
  
     0.501
L195_g060692
Gag-pol polyprotein.
  
     0.495
L195_g014163
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.492
L195_g037496
Pentatricopeptide repeat-containing protein mitochondrial-like.
  
     0.491
L195_g019124
Gag-pol polyprotein.
  
     0.485
L195_g051450
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.483
L195_g051704
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.483
L195_g048602
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.482
L195_g053728
Putative gag-pol polyprotein.
  
     0.480
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.