STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g053182Putative copia-type protein. (107 aa)    
Predicted Functional Partners:
L195_g058464
Uncharacterized protein.
  
     0.527
L195_g060657
Copia-type polyprotein.
  
     0.522
L195_g049383
Gag-pol polyprotein.
  
     0.520
L195_g026149
Copia protein.
  
     0.519
L195_g048972
Uncharacterized protein.
  
     0.517
L195_g060572
Uncharacterized protein.
  
     0.517
L195_g046995
Putative copia-type protein.
  
     0.517
L195_g059500
Uncharacterized protein.
  
     0.513
L195_g059701
Gag-pol polyprotein.
  
     0.512
L195_g061139
Gag-pol polyprotein.
  
     0.504
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.