STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g053409CC-NBS-LRR resistance protein. (233 aa)    
Predicted Functional Partners:
L195_g048512
Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
  0.608
L195_g015210
Mannan endo-1,4-beta-mannosidase.
  
 
   0.494
L195_g057142
Uncharacterized protein.
  
     0.492
L195_g009783
Flocculation protein flo11-like.
  
     0.492
L195_g017846
Uncharacterized protein.
  
     0.491
L195_g036601
Uncharacterized protein.
  
 
   0.488
L195_g019736
Uncharacterized protein.
  
     0.488
L195_g040393
Haloacid dehalogenase-like hydrolase.
  
     0.487
L195_g040817
Ankyrin repeat-containing protein.
  
 
   0.487
L195_g041683
26S proteasome non-ATPase regulatory subunit 10-like protein.
  
 
   0.485
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.