STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g053490Protodermal factor 1-like protein. (150 aa)    
Predicted Functional Partners:
L195_g011882
Mitochondrial GTPase 1-like protein.
  
     0.521
L195_g030324
G-type lectin S-receptor-like serine/threonine-protein kinase.
  
     0.519
L195_g018565
BURP domain-containing protein.
  
     0.515
L195_g051233
Pentatricopeptide repeat-containing protein mitochondrial-like.
  
     0.512
L195_g008538
Uncharacterized protein.
  
     0.509
L195_g003773
Retinoblastoma-related protein 1-like.
  
     0.504
L195_g030470
BURP domain-containing protein.
  
     0.496
L195_g037245
G-type lectin S-receptor-like serine/threonine-protein kinase.
  
     0.495
L195_g040079
BURP domain protein.
  
     0.493
L195_g017806
Xyloglucan endotransglucosylase/hydrolase.
  
     0.491
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.