STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g053696Photosystem I reaction center subunit III chloroplastic-like. (139 aa)    
Predicted Functional Partners:
L195_g015392
Photosystem I reaction center subunit II chloroplastic-like.
  
  
  0.662
L195_g030949
Photosystem I reaction center subunit IV chloroplastic-like.
  
  
  0.640
L195_g048304
Photosystem II CP47 chlorophyll apoprotein.
  
  
  0.631
L195_g015171
Photosystem I reaction center subunit IV chloroplastic-like.
  
  
  0.626
L195_g007684
Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
  
  
  0.624
L195_g034728
Photosystem II protein D2.
  
  
  0.581
L195_g002483
PsbP-like protein.
  
  
  0.573
L195_g017329
Oxygen-evolving enhancer protein chloroplastic-like.
  
  
  0.571
L195_g051027
Photosystem II protein D1.
  
  
  0.540
L195_g008215
PsbP-like protein 1 chloroplastic-like.
  
  
  0.484
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.