STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g053968Cinnamoyl CoA reductase. (137 aa)    
Predicted Functional Partners:
L195_g007666
Trans-cinnamate 4-monooxygenase; Belongs to the cytochrome P450 family.
   
 0.903
L195_g042928
Cinnamic acid 4-hydroxylase.
   
 0.897
L195_g027457
4-coumarate-CoA ligase 9-like protein.
   
 0.894
L195_g026880
Caffeoyl-CoA O-methyltransferase at1g67980-like.
  
 
 0.887
L195_g056485
Caffeic acid 3-O-methyltransferase.
   
 
 0.884
L195_g033650
4-coumarate-CoA ligase 1-like protein.
   
 0.878
L195_g024417
4-coumarate-CoA ligase 7-like protein.
   
 0.875
L195_g013606
Shikimate O-hydroxycinnamoyltransferase.
   
 0.862
L195_g037644
Reticuline oxidase-like protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
   
  0.838
L195_g007172
Vinorine synthase-like protein.
   
 0.838
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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